CDS

Accession Number TCMCG057C48013
gbkey CDS
Protein Id XP_018453315.1
Location complement(join(6435400..6435478,6435757..6435862,6436142..6436247))
Gene LOC108824395
GeneID 108824395
Organism Raphanus sativus

Protein

Length 96aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018597813.1
Definition PREDICTED: transcription elongation factor B polypeptide 1 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description Belongs to the SKP1 family
KEGG_TC -
KEGG_Module M00383        [VIEW IN KEGG]
M00388        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K03872        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04066        [VIEW IN KEGG]
ko04120        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05211        [VIEW IN KEGG]
map04066        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05211        [VIEW IN KEGG]
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000153        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0008023        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030891        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032784        [VIEW IN EMBL-EBI]
GO:0032786        [VIEW IN EMBL-EBI]
GO:0032968        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034243        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070449        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGAGAGACGGTGAAGTTGATAAGCATGGAGGGTTTCGAGTTCGTGATCGACAAGGAAGCCGCCATGGTTTCACAGACTATAAGAAGCATGCTCACTTCTCCAGGTGGGTTTTCGGAGTCGAAAGATGGCGTGGTGACTTTCCCTGATATCAGCACTACAATTCTTGAGAAGATTTGCCAGTACTTCTATTGGTCTCTTCAATACTCCAGAGGCAAAGAGACCGAGTTCCACATTGAGCCTGAGCTGACCTTGGAGCTCATGATGGCTGCTAATTATCTTCACACTTGA
Protein:  
MRETVKLISMEGFEFVIDKEAAMVSQTIRSMLTSPGGFSESKDGVVTFPDISTTILEKICQYFYWSLQYSRGKETEFHIEPELTLELMMAANYLHT